PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S26817.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 95aa    MW: 10967.5 Da    PI: 9.5206
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S26817.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-204594255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  Jcr4S26817.10 45 RYVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 94
                   79*******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.20E-264495No hitNo description
PROSITE profilePS5103219.0454595IPR001471AP2/ERF domain
SMARTSM003803.8E-234595IPR001471AP2/ERF domain
PfamPF008471.2E-154594IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-254595IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-174594IPR016177DNA-binding domain
PRINTSPR003674.8E-94657IPR001471AP2/ERF domain
PRINTSPR003674.8E-96884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MSLMRKRKAK STSHEEEPIN YESISWDKVL EEAVTLTGEL RPRKRYVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTYDTAEE AARAYDEAAC LLRGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012068341.12e-57PREDICTED: uncharacterized protein LOC105630951
SwissprotQ6J9S11e-27RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLB9S9207e-41B9S920_RICCO; Putative uncharacterized protein
STRINGGLYMA18G49761.18e-34(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-16related to AP2 11